Browse of TCMCG007C12510 protein

CDS

Accession Number	TCMCG007C12510
gbkey	CDS
Protein Id	XP_009127282.2
Location	complement(join(8284836..8284950,8285051..8285412,8285533..8285718,8285821..8285994,8286080..8286211,8286378..8286608,8287166..8287243,8287333..8287398,8287509..8287589,8287751..8288520,8288633..8288829,8289041..8289135,8289220..8289360,8289717..8289794,8289982..8290110,8290386..8290517,8290599..8290718,8290812..8290863,8290966..8291097,8291269..8291321,8291406..8291501,8291867..8292012,8292315..8292450,8292536..8292689,8292763..8293253))
Gene	LOC103852133
GeneID	103852133
Organism	Brassica rapa

Protein

Length	1448aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009129034.3
Definition	cleavage and polyadenylation specificity factor subunit 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGTTTCGCGGCCTTCAAGATGATGCATTGGCCCACCGGCGTCGAGAACTGCGCCTCCGGCTACATTACCCACTCCATCTCCGACACAACTCCGATGCAGATTCCCATCACCTCCGGCGACGACCTCGACCCCGATTGGCCCGCTCCCCCCAAGCGCGGGATCTGCGCCGTGCCTAACGTCGTCGTAACCGCCGCCAACGTCCTCGAGGTGTACGTGGTTAGGGTTCAGGAGGAAGGGAACGGTGCTAGCAGCCTGGAGCCGAGGGGGCAGAGGCTCGCTAAGCGCGGCGGAGTATTGGACGGCGTCTCCGGCGTTTCCCTCGAGCTCGTGTGCCATTACAGGCTCCACGGCAACGTTGAGTCGCTCGCGGTGCTTCCTATGGGAGGAGGGAACTCCACCAGGGGGAGGGATTCCATCGTGGTGACGTTCCGCGACGCGAAGATCTCGGTTCTTGAGTTTGATGATTCGATTCATAGTCTTCGATTGAACTCGATGCACTGTTTCGAGGGTCCGGATTGGCTTCATCTGAAAAGAGGAAGAGAGTCGTTTCCAAGAGGGCCTTTGGTGAAAGTGGATCCTCAAGGGAGGTGTGGAGGTGTTCTTGTTTACGGTTTGCAGCTGATCATACTCAAGGCTTCTCAGGTTGGTTCTGGACTAGTTGGGGACGATGATGCGTTCACTTCTGGTGGGACAATTTCTGCTCGAGTTGAATCATCTTACATAATCAACTTGCGTGATCTCGGAATGAAACACGTCAAAGATTTTGTTTTTCTACATGGTTATATTGAGCCTGTAATTGTAATCCTTCAGGAAGAAGAGCATACATGGGCTGGGAGAGTTTCATGGAAGCACCATACTTGCATGCTTTCTGCTCTTAGTATCAATACGACATTAAAACAACACCCAGTCATCTGGTCAGCTATTAATCTGCCCCATGATGCCTACAAACTACTTGCAGTACCATCTCCGATCGGTGGTGTTCTTGTGTTGTGTGCAAATACAATCCATTATCATAGTCAGTCAGCCTCCTGTGCTCTGGCACTGAACAATTATGCCTCCTCAGCTGATAGCAGTCAAGAACTGCCTGCATCAAGTTTCAGTGTGGAACTCGATGCTGCCCATGGAACCTGGATATCGAACGATGTGGCTCTTTTGTCAACGAAGTCTGGGGAATTGTTGCTGCTGACTCTTATATATGATGGGCGTGCTGTGCAGAGACTTGATCTTTCCAAATCAAAAGCCTCTGTGCTTGCTTCGGACATTACTAGTGTTGGAAATTCCCTTTTCTTTTTAGGTAGCCGTTTGGGAGACAGTTTACTGGTTCAATATTCCTGTAGATCTGGACCCGCAGCATCCTTACCTGGGTTGAGAGATGAGGATGAAGATATTGAAGGTGAGAGTCATCAAGCAAAACGTCTGCGGATGTCTTCTGATGCTTTTCAAGATACAGTTGGAAACGAGGAGCTTTCATTGTTTGGTTCAGCCCCAAATAACTCCGATTCATCACAGAAATCATTTTCATTTGCAGTGAGAGATTCACTAGTTAATGTTGGTCCAGTGAAAGATTTTGCTTATGGCTTAAGGATAAATGCTGATGCAAACGCCACTGGGATTTCCAAACAGAGCAACTATGAATTGGTGTGCTGTTCTGGTCATGGGAAGAATGGTGCTTTATCTGTTCTTCGGCAGTCAATTAGACCCGAAATGATTACTGAGGTTGAACTTGGAAGCTGCAAAGGAATATGGACAGTTTATCACAAGAGCTCCCGTGGTCATAATGTTGATTCTTCTAAAATGGCTGCTGATGAGGATGAATATCATGCCTATTTGATTATAAGTTTGGAGGCTCGCACTATGGTACTTGAAACTGCGGACCTTCTCACAGAAGTCACTGAGAGTGTTGACTATTATGTTCAGGGAAGAACAATTGCTGCTGGAAATTTGTTTGGAAGACGTCGGGTAATCCAGGTGTTTGAGCATGGTGCCCGTATACTGGATGGTTCTTTTATGAATCACGAATTAAACTTTGGAGCTTCTAATACAGAATCCAATTCTGGTTCTGAAAGTTCCACTGTGGCATCTGTTTCAATTGCCGATCCATATGTTTTACTTAGAATGACAGATGGCAGCATTCGCCTGCTTGTTGGAGATCCTTCGACTTGCACAGTTTCTATAAGTACTCCATCTGTACTTGAAGGCTCTAAAAGGAAGGTATCGGCATGTACTTTGTACCATGATAAAGGACCAGAACCCTGGCTAAGGAAAGCTAGCACTGATGCATGGCTTTTGTCAGGAGTTGGAGAGGCTGTTGATAGTGCTGATGGTGGACCTCATGATCAGGGTGACATATACTGTGTCCTTTGCTACGAAAGTGGTGCCCTTGAGATATTTGATGTGCCTAGTTTCAATTGTGTTTTCTCTGTTGATAAATTTGCATCTGGAAGAAGCCACCTCTCTGATATGCCTATTCATGAGCTAGAGTATGAACTCAACAAAAAATCCCAGGATAATGTTTCTGCAAGGAATGAAGACATTGTGAAGACAAAGGTCGTTGAGTTAGCTATGCAAAGATGGTCTGGGCACCATACACGCCCATTTCTGTTTGCAGTTTTGGCTGATGGCACAATTCTTTGTTACCATGCTTACCTGTTTGAGGGTGTTGATGGTACCAACGCAGAGAATAGTGTTTCTTCAGAAAATCCTGCTGCGTTAAATTCCTCCAGCAGTTCTAAGCTTAGGAATCTGAGATTTCTCCGCATCCCCTTGGACACGTCTACGAGAGAGGAGACTTCAGACGGTGTTGCAGCTCAAAGAATTACCATGTTCAAGAATATTAGCGGTCACCAGGGATTTTTTCTTTCTGGCTCAAGACCAGGTTGGTGCATGTTGTTCAGAGAAAGACTTCGATTTCATTCACAGCTGTGCGATGGATCAATTGTGGCTTTTACTGTGCTTCACAATGTGAATTGCAATCACGGATTCATATATGTCACGTCACAGGGAGTTTTGAAGATTTGCCAATTACCTTCAGCACCAGTCTACGATAACTATTGGCCAGTGCAAAAGATTCCTCTGAAGGCCACGCCTCACCAAGTTACTTACTACGCGGAGAAGAACTTGTACCCACTGATAGTATCATATCCGGTCAGCAAGCCATTGCATCAAGTGCTTTCTTCCCTAGTTGATCAAGAAGCTGGGCAGCAGATTGACAACCATAATCTGAGCTCTGATGATCTCCAACGACCATACACCGTTGAGGAATTTGAAATCCGAATTTTGGAACCAGAAAGATCGGGTGGCCCTTGGGAAACTAAAACCACTATTCCAATGCAGAGCTCAGAACATGCACTCACTGTGCGAGTTGTCACACTTCTTAATGCAAGCACAGCGGAGAATGAAACCCTTCTTGCCGTTGGAACTGCTTATGTCCAAGGGGAGGACGTTGCTGCAAGGGGCCGTGTGCTTCTTTTCTCTTTTGGAAGAAATGGCGATAATTCTCAAAGTTTGGTTACTGAAGTCTACTCAAAGGAACTAAAAGGAGTTGTATCAGCTGTAGCCTCCATTCAGGGTCATCTTCTAATATCATCTGGTCCTAAAGTCACCTTGCACAAATGGAATGGCACTGAATTAACTGGTGTTGCTTTCTTTGATCCGCCGCTCTATGTAGTCAGCATGAATGTGGTAAAGAATTTCATCCTCCTTGGTGACGTTCACAAAAGCGTATACTTTCTTAGCTGGAAAGAACAAGGGTCCCAACTTAGCTTACTAGCCAAAGATTTTGGATCCCTCGATTGTATGGCTTCAGAGTTTTTGATTGATGGAAGTACGCTAAGCCTGGCTGTCTCCGATCAGCAAAAGAATCTCCAGATATTCTATTTCGCACCGAAGATGTCGGAGAGCTGGAAGGGTCAGAAACTTCTGTCAAGGGCGGAATTTCACGTGGGTGCGCATGTGACAAAGTTCCTGCGTCTGCAGATGGTTGAATCTCTCAGCGCGGATAAAAAAAGTCGATACGCTTCGTTATTTGGTACTCTAGACGGCAGTTTTGGTTGCATAGCTCCACTAGATGAGGTCACATTCCGTAGGTTACAGTCTCTCCAGAAAAAGCTAGTGGATGCTGTTCCTCATGTTGCCGGTCTGAACCCACGCTCTTTCCGTCAGTTCCGCTCGAGTGGTAAGGCTCGAAAACCTGGGCCTGACAGCATAATCGACTGCGAGCTACTCTGCCATTACGAGATGCTTCCACTAGAGGAGCAGCATGCACTTGCTCAGCAGATTGGGACAACCCGAGCTCAGATTTTTGCGAATCTAGTTGAGCTCTCTGTCGGAACCAGCTTCTTGTGA

Protein:   MSFAAFKMMHWPTGVENCASGYITHSISDTTPMQIPITSGDDLDPDWPAPPKRGICAVPNVVVTAANVLEVYVVRVQEEGNGASSLEPRGQRLAKRGGVLDGVSGVSLELVCHYRLHGNVESLAVLPMGGGNSTRGRDSIVVTFRDAKISVLEFDDSIHSLRLNSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGRCGGVLVYGLQLIILKASQVGSGLVGDDDAFTSGGTISARVESSYIINLRDLGMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCMLSALSINTTLKQHPVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELPASSFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASDITSVGNSLFFLGSRLGDSLLVQYSCRSGPAASLPGLRDEDEDIEGESHQAKRLRMSSDAFQDTVGNEELSLFGSAPNNSDSSQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGISKQSNYELVCCSGHGKNGALSVLRQSIRPEMITEVELGSCKGIWTVYHKSSRGHNVDSSKMAADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGARILDGSFMNHELNFGASNTESNSGSESSTVASVSIADPYVLLRMTDGSIRLLVGDPSTCTVSISTPSVLEGSKRKVSACTLYHDKGPEPWLRKASTDAWLLSGVGEAVDSADGGPHDQGDIYCVLCYESGALEIFDVPSFNCVFSVDKFASGRSHLSDMPIHELEYELNKKSQDNVSARNEDIVKTKVVELAMQRWSGHHTRPFLFAVLADGTILCYHAYLFEGVDGTNAENSVSSENPAALNSSSSSKLRNLRFLRIPLDTSTREETSDGVAAQRITMFKNISGHQGFFLSGSRPGWCMLFRERLRFHSQLCDGSIVAFTVLHNVNCNHGFIYVTSQGVLKICQLPSAPVYDNYWPVQKIPLKATPHQVTYYAEKNLYPLIVSYPVSKPLHQVLSSLVDQEAGQQIDNHNLSSDDLQRPYTVEEFEIRILEPERSGGPWETKTTIPMQSSEHALTVRVVTLLNASTAENETLLAVGTAYVQGEDVAARGRVLLFSFGRNGDNSQSLVTEVYSKELKGVVSAVASIQGHLLISSGPKVTLHKWNGTELTGVAFFDPPLYVVSMNVVKNFILLGDVHKSVYFLSWKEQGSQLSLLAKDFGSLDCMASEFLIDGSTLSLAVSDQQKNLQIFYFAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMVESLSADKKSRYASLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSSGKARKPGPDSIIDCELLCHYEMLPLEEQHALAQQIGTTRAQIFANLVELSVGTSFL